Package: scBio 0.1.6
scBio: Single Cell Genomics for Enhancing Cell Composition Inference from Bulk Genomics Data
Cellular population mapping (CPM) a deconvolution algorithm in which single-cell genomics is required in only one or a few samples, where in other samples of the same tissue, only bulk genomics is measured and the underlying fine resolution cellular heterogeneity is inferred.
Authors:
scBio_0.1.6.tar.gz
scBio_0.1.6.zip(r-4.7-any)scBio_0.1.6.zip(r-4.6-any)scBio_0.1.6.zip(r-4.5-any)
scBio_0.1.6.tgz(r-4.6-any)scBio_0.1.6.tgz(r-4.5-any)
scBio_0.1.6.tar.gz(r-4.7-any)scBio_0.1.6.tar.gz(r-4.6-any)
scBio_0.1.6.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
scBio/json (API)
| # Install 'scBio' in R: |
| install.packages('scBio', repos = c('https://amitfrish.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/amitfrish/scbio/issues
- BulkFlu - Gene expression profiles of flu and pbs sample.
- SCCellSpace - Single-cell cell space.
- SCFlu - Gene expression profiles of lung cells after influenza infection.
- SCLabels - Single-cell classification into cell types.
Last updated from:0b89273888. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 121 | ||
| source / vignettes | OK | 150 | ||
| linux-release | OK | 125 | ||
| macos-release | OK | 165 | ||
| macos-oldrel | OK | 220 | ||
| windows-devel | OK | 68 | ||
| windows-release | OK | 67 | ||
| windows-oldrel | OK | 63 | ||
| wasm-release | OK | 115 |
Exports:CPM
Dependencies:codetoolsdoSNOWdotCall64fieldsforeachiteratorslatticeLiblineaRlimmamapsrasterRColorBrewerRcppsnowspspamstatmodterraviridisLite
